TRNT1 (NM_182916.3) sequence variants
(CCA1, RPEM, SIFD, MtCCA, CGI-47)

Editor(s): Guilaine BOURSIER   

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Total current number of sequence variants for TRNT1 : 36

*Name as first published or submitted to Infevers. May be different from the HGVS edited protein and sequence names.

** If you have new data: please send us a re-evaluation proposal here

HGVS sequence name
HGVS protein name
Usual name*
Classification**
Status**
Simple variant
Complex alleles
exon 2
c.88A>G
p.(Met30Val)
M30V
Uncertain significance (VUS)To be validated
 2022-02-21 
exon 2
c.128_130del
p.(Glu43del)
c.126_128delAGA
Likely pathogenicTo be validated
 2019-01-222020-03-03
exon 2
c.143_144insTT
p.(Thr49*)
T49*
Likely pathogenicTo be validated
 2021-10-07 
exon 3
c.295C>T
p.(Arg99Trp)
R99W
Likely pathogenicTo be validated
 2019-01-222021-12-08
intron 3
c.342+5G>T
p.?
c.342+5G>T
Likely pathogenicTo be validated
 2019-01-22 
exon 4
c.363G>T
p.(Glu121Asp)
E121D
Likely pathogenicTo be validated
 2022-02-21 
exon 4
c.383A>G
p.(Asp128Gly)
D128G
Likely pathogenicTo be validated
 2019-01-22 
exon 4
c.443C>T
p.(Ala148Val)
A148V
Likely pathogenicTo be validated
 2019-01-22 
exon 4
c.448C>T
p.(Arg150Cys)
R150C
Likely pathogenicTo be validated
 2019-01-212019-01-22
exon 4
c.461C>T
p.(Thr154Ile)
T154L
Uncertain significance (VUS)To be validated
 2019-01-212020-03-03
exon 4
c.464T>C
p.(Ile155Thr)
I155T
Likely pathogenicTo be validated
 2019-01-22 
exon 4
c.472A>G
p.(Met158Val)
M158V
PathogenicTo be validated
 2019-01-212020-03-03
exon 5
c.497T>C
p.(Leu166Ser)
L166S
PathogenicTo be validated
 2019-01-212020-03-03
exon 5
c.498_501del
p.(Phe167Thrfs*9)
F167Tfs*9
Not classifiedTo be validated
 2021-01-112021-02-12
exon 5
c.518A>T
p.(Tyr173Phe)
Y173F
Likely pathogenicTo be validated
 2019-01-22 
exon 5
c.527del
p.(Leu176*)
p.Leu176X
PathogenicTo be validated
 2021-02-12 
exon 5
c.569G>T
p.(Arg190Ile)
R190I
PathogenicTo be validated
 2019-01-212019-01-21
exon 5
c.574C>T
p.(Gln192*)
Q192*
Likely pathogenicTo be validated
 2023-03-03 
exon 5
c.608G>A
p.(Arg203Lys)
R203K
Likely pathogenicTo be validated
 2019-01-22 
intron 5
c.608+1G>T
p.?
c.608+1G>T
PathogenicTo be validated
 2019-01-212019-01-21
exon 6
c.668T>C
p.(Ile223Thr)
I223T
PathogenicTo be validated
 2019-01-212021-02-12
exon 7
c.829G>T
p.(Glu277*)
E77X
PathogenicTo be validated
 2021-02-12 
exon 7
c.938T>C
p.(Leu313Ser)
p.Leu313Ser
Likely pathogenicTo be validated
 2021-02-12 
exon 7
c.947C>T
p.(Ala316Val)
A316V
Likely pathogenicTo be validated
 2021-02-12 
exon 7
c.947_948insG
p.(Glu318Argfs*11)
p.(Glu318Argfs*11)
PathogenicTo be validated
 2021-02-122021-02-12
exon 7
c.948_949delinsGG
p.(Lys317Glu)
c.948–949delAAinsGG
Uncertain significance (VUS)To be validated
 2022-09-25 
exon 7
c.977T>C
p.(Ile326Thr)
I326T
Uncertain significance (VUS)To be validated
 2019-01-212021-02-12
exon 7
c.1043A>T
p.(Asp348Val)
D348V
Likely pathogenicTo be validated
 2021-10-07 
exon 7
c.1054_1056+10del
p.?
c.1054_1056+10del
PathogenicTo be validated
 2019-01-212020-03-03
intron 7
c.1056+1G>A
p.?
p.?
Likely pathogenicTo be validated
 2023-03-032023-03-03
intron 7
c.1057-7C>G
p.?
c.1057-7C>G
Likely pathogenicTo be validated
 2019-01-212019-01-21
exon 8
c.1142_1143insATGT
p.(Trp381*)
W381*
PathogenicTo be validated
 2019-01-212019-01-21
exon 8
c.1213G>A
p.(Gly405Arg)
G405R
Likely pathogenicTo be validated
 2019-01-22 
exon 8
c.1246A>G
p.(Lys416Glu)
K416E
Likely pathogenicTo be validated
 2019-01-212021-02-12
exon 8
c.1252del
p.(Ser418Valfs*11)
c.1246del
Likely pathogenicTo be validated
 2019-01-22 
exon 8
c.1252dup
p.(Ser418Lysfs*9)
S418fs
PathogenicTo be validated
 2019-01-212019-01-21